Agents: Honey-Dens and Dreaming

Why would they not want to go back and de-equip them when it is doing literally nothing for them and they have a better use for the gear?

Certainly the fiddly clicky reallocation of equipment among agents threatens to become a significant QoL hassle, and that is FBG’s problem to solve. But from a player’s perspective, the situation as it stands now is simply the situation as it stands now